How To Setup SSH Keys on a Linux / Unix System

I recently read that SSH keys provide a secure way of logging into a Linux and Unix-based server. How do I set up SSH keys on a Linux or Unix based systems?

In SSH for Linux/Unix, how do I set up public key authentication?


I am assuming that you are using Linux or Unix-like server and client with the following software:

OpenSSH SSHD server

OpenSSH ssh client and friends on Linux (Ubuntu, Debian, {Free,Open,Net}BSD, RHEL, CentOS, MacOS/OSX, AIX, HP-UX and co).

What is a public key authentication?

OpenSSH server supports various authentication schema. The two most popular are as follows:

Passwords based authentication

Public key based authentication. It is an alternative security method to using passwords. This method is recommended on a VPS, cloud, dedicated or even home based server.

How to set up SSH keys

Steps to setup secure ssh keys:

Create the key pair using ssh-keygen command.

Copy and install the public key using ssh-copy-id command.

Add yourself to sudo admin account.

Disable the password login for root account.

Let us see all steps in details.

How do I set up public key authentication?

You must generate both a public and a private key pair. For example:

Fig.01: Our sample setup


Where, – You store your public key on the remote hosts and you have an accounts on this Linux/Unix based server. – Your private key stays on the desktop/laptop/ computer (or local server) you use to connect to server. Do not share or give your private file to anyone.

In public key based method you can log into remote hosts and server, and transfer files to them, without using your account passwords.

Feel free to replace and names with your actual setup. Enough talk, let’s set up public key authentication. Open the Terminal and type following commands if .ssh directory does not exists:

mkdir -p $HOME/.ssh

chmod 0700 $HOME/.ssh

#1: Create the key pair

On the computer (such as, generate a key pair for the protocol.

ssh-keygen -t rsa

Sample outputs:

Generating public/private rsa key pair.

Enter file in which to save the key (/Users/vivek/.ssh/id_rsa):

Enter passphrase (empty for no passphrase):

And Enter same passphrase again:

Your identification has been saved in /Users/vivek/.ssh/id_rsa.

Your public key has been saved in /Users/vivek/.ssh/

The key fingerprint is:

80:5f:25:7c:f4:90:aa:e1:f4:a0:01:43:4e:e8:bc:f5 vivek@desktop01

The key s randomart image is:

+–[ RSA 2048]—-+

| oo    …+.     |

|.oo  .  .ooo     |

|o .o. . .o  .    |

| o …+o.        |

|  o .=.=S        |

| .  .Eo .        |



You need to set the Key Pair location and name. I recommend you use the default location if you do not yet have another key there, for example: $HOME/.ssh/id_rsa. You will be prompted to supply a passphrase (password) for your private key. I suggest that you setup a passphrase when prompted. You should see two new files in $HOME/.ssh/ directory:

$HOME/.ssh/id_rsa– contains your private key.

$HOME/.ssh/ – contain your public key.

Optional syntax for advance users

The following syntax specifies the 4096 of bits in the RSA key to creation (default 2048):

$ ssh-keygen -t rsa -b 4096 -f ~/.ssh/vps-cloud.web-server.key -C  My web-server key



-t rsa : Specifies the type of key to create. The possible values are “rsa1” for protocol version 1 and “dsa”, “ecdsa”, “ed25519”, or “rsa” for protocol version 2.

-b 4096 : Specifies the number of bits in the key to create

-f ~/.ssh/vps-cloud.web-server.key : Specifies the filename of the key file.

-C  My web-server key  : Set a new comment.

#2: Install the public key in remote server

Use scp or ssh-copy-id command to copy your public key file (e.g., $HOME/.ssh/ to your account on the remote server/host (e.g., To do so, enter the following command on your

ssh-copy-id -i $HOME/.ssh/

OR just copy the public key in remote server as authorized_keys in ~/.ssh/ directory:

scp $HOME/.ssh/

A note about appending the public key in remote server

On some system ssh-copy-id command may not be installed, so use the following commands (when prompted provide the password for remote user account called vivek) to install and append the public key:

First create .ssh directory on server ##

ssh  umask 077; test -d .ssh || mkdir .ssh


cat local file and pipe over ssh to append the public key in remote server ##

cat $HOME/.ssh/ | ssh  cat >> .ssh/authorized_keys

#3: Test it (type command on

The syntax is:


Or copy a text file called foo.txt:

scp foo.txt

You will be prompted for a passphrase. To get rid of passphrase whenever you log in the remote host, try ssh-agent and ssh-add commands.

What are ssh-agent and ssh-add, and how do I use them?

To get rid of a passphrase for the current session, add a passphrase to ssh-agent and you will not be prompted for it when using ssh or scp/sftp/rsync to connect to hosts with your public key. The syntax is as follows:

eval $(ssh-agent)

Type the ssh-add command to prompt the user for a private key passphrase and adds it to the list maintained by ssh-agent command:


Enter your private key passphrase. Now try again to log into and you will not be prompted for a password:


#4: Disable the password based login on a server

Login to your server, type:

client commands ##

eval $(ssh-agent)



Edit /etc/ssh/sshd_config on using a text editor such as nano or vim:

Warning: Make sure you add yourself to sudoers files. Otherwise you will not able to login as root later on. See “How To Add, Delete, and Grant Sudo Privileges to Users on a FreeBSD Server” for more info.

$ sudo vim /etc/ssh/sshd_config


OR directly jump to PermitRootLogin line using a vim text editor:

$ sudo vim +/PermitRootLogin /etc/ssh/sshd_config


Find PermitRootLogin and set it as follows:

PermitRootLogin no

Save and close the file. I am going to add a user named vivek to sudoers on Ubuntu Linux:

# adduser vivek


Finally, reload/restart the sshd server, type command as per your Linux/Unix version:

CentOS/RHEL/Fedora (older version) Linux server reload sshd ##

sudo service sshd reload


CentOS/RHEL/Fedora (latest version i.e. systemd based) Linux server reload sshd ##

sudo systemctl reload sshd


Debian/Ubuntu Linux (older version) server reload sshd ##

sudo /etc/init.d/ssh reload


Debian/Ubuntu Linux (systemd based latest) server reload sshd ##

sudo systemctl reload ssh


Generic Unix method to reload sshd ##

sudo kill -HUP cat /var/run/


sudo kill -HUP $(cat /var/run/

#5: How to add or replace a passphrase for an existing private key?

To to change your passphrase type the following command:

ssh-keygen -p

#6: How to backup an existing private/public key?

Just copy files to your backup server or external USB pen/hard drive:

Copy files to  home based nas server ##

rsync -avr $HOME/.ssh user@home.nas-server:/path/to/encrpted/nas/partition/


Copy files to  usb pen drive mounted at /mnt/usb ##

cp -avr $HOME/.ssh/ /mnt/usb/backups/

How do I protect my ssh keys

Always use a strong passphrase.

Do not share your private keys anywhere online or store in insecure cloud storage.

Restrict privileges of the account.

How do I create and setup an OpenSSH config file to create shortcuts for servers I frequently access?

See how to create and use an OpenSSH ssh_config file for more info.

See also

keychain: Set Up Secure Passwordless SSH Access For Backup Scripts

Ubuntu / Debian Linux Server Install Keychain SSH Key Manager For OpenSSH

Man pages – ssh(1),ssh-agent(1),ssh-add(1),ssh-keygen(1)

And, there you have it, ssh set up with public key based authentication for Linux or Unix-like systems.



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